Color : better default color scale

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Remi-C
Posts: 21
Joined: Sun Mar 23, 2014 4:18 pm

Color : better default color scale

Post by Remi-C »

Hey,
I recently stumbled upon an interesting open source redesign of color scale by Matplotlib team (a major python plotter), it appears quite serious.

Of course I thought about my favourite point cloud software.

The color scale they designed have several advantages, such as being print friendly, colour-blindness friendly, and importantly, perceptually uniform.
That is, if your scalar field goes from 1 to 10, 2 will appear as far from 1 as from 3.

http://bids.github.io/colormap/

It looks like a minor change to CloudCompare, but a major step for usability and attractiveness.
Options A,B,C,D would each be interesting for point clouds (although option C might clash with classical background color).

This may not prove to be perfect for point clouds, but it is more than worth a try !

Cheers,
Rémi-C
daniel
Site Admin
Posts: 7713
Joined: Wed Oct 13, 2010 7:34 am
Location: Grenoble, France
Contact:

Re: Color : better default color scale

Post by daniel »

Thanks for the info. I guess we could add them to CC without too much problem indeed.

But of course you'll still need to define 'absolute' equivalents of these colormaps to get the right correspondance with values.
Daniel, CloudCompare admin
daniel
Site Admin
Posts: 7713
Joined: Wed Oct 13, 2010 7:34 am
Location: Grenoble, France
Contact:

Re: Color : better default color scale

Post by daniel »

In the end I added the Viridis colormap to CC.

The issue of these color scales is that they are 'static' colorscales (256 different colors) and we don't have the code to generate the color for any given value. This is not how CC works and I fear that the result will be quite slow.
Daniel, CloudCompare admin
jdlinke
Posts: 3
Joined: Fri Dec 22, 2017 4:37 am

Re: Color : better default color scale

Post by jdlinke »

Remi-C, I was trying to do exactly what you're describing in order to get a better view of some huge point cloud data I'm working with. I couldn't find anything that helped, and didn't want to make xml files manually, but I wrote a little script to do what you originally asked about.

In the attached zip are color scales for the following matplotlib colormaps: Blues, cool, winter, inferno, magma, and plasma.

You can also use the python code below to generate the xml to make a Cloud Compare color scale for any matplotlib colormap (see: https://matplotlib.org/examples/color/c ... rence.html).

If you need another scale and can't get the script to work, let me know and I'll post it.

Code: Select all

'''
This script will take any matplotlib colormap and output
the xml for a CloudCompare 256 color scale.

(Jack Linke 2017)
'''

from matplotlib import cm
from math import trunc
import uuid

# Change the name in quotes to your desired colormap:
cmap = cm.get_cmap('Blues')

segment = 1 / 255

print('<?xml version="1.0" encoding="UTF-8"?>')
print('<CloudCompare>')
print('    <ColorScale version="1">')
print('        <Properties>')
print('            <name>Viridis_copy</name>')
print('            <uuid>{' + str(uuid.uuid4()) + '}</uuid>')
print('            <absolute>0</absolute>')
print('        </Properties>')
print('        <Data>')

for x in range(0, 256):
    rgba = cmap(x * segment)
    r = str(trunc(rgba[0] * 255))
    g = str(trunc(rgba[1] * 255))
    b = str(trunc(rgba[2] * 255))
    print('            <step r="' + r + '" g="' + g + '" b="' + b + '" pos="' + str(x * segment) + '"/>')

print('        </Data>')
print('    </ColorScale>')
print('</CloudCompare>')

Attachments
CC_ColorScales.zip
(15.23 KiB) Downloaded 834 times
jdlinke
Posts: 3
Joined: Fri Dec 22, 2017 4:37 am

Re: Color : better default color scale

Post by jdlinke »

Oops, made a small mistake in my previous post which results in all color scales having the same name. Here's the correction and corrected zipped files:

Code: Select all

'''
This script will take any matplotlib colormap and output the xml
for a CloudCompare 256 color scale. Here's a list of Matplotlib maps:

https://matplotlib.org/examples/color/colormaps_reference.html
'''

from matplotlib import cm
from math import trunc
import uuid

# Change the name in quotes to your desired colormap:
colormap = 'winter'

cmap = cm.get_cmap(colormap)

segment = 1 / 255

print('<?xml version="1.0" encoding="UTF-8"?>')
print('<CloudCompare>')
print('    <ColorScale version="1">')
print('        <Properties>')
print('            <name>' + colormap + '</name>')
print('            <uuid>{' + str(uuid.uuid4()) + '}</uuid>')
print('            <absolute>0</absolute>')
print('        </Properties>')
print('        <Data>')

for x in range(0, 256):
    rgba = cmap(x * segment)
    r = str(trunc(rgba[0] * 255))
    g = str(trunc(rgba[1] * 255))
    b = str(trunc(rgba[2] * 255))
    print('            <step r="' + r + '" g="' + g + '" b="' + b + '" pos="' + str(x * segment) + '"/>')

print('        </Data>')
print('    </ColorScale>')
print('</CloudCompare>')
Attachments
CC_ColorScales_v2.zip
(15.18 KiB) Downloaded 897 times
jdlinke
Posts: 3
Joined: Fri Dec 22, 2017 4:37 am

Re: Color : better default color scale

Post by jdlinke »

Last change, I swear. This modified version solved daniel's concerns. You can now select the number of segments you want to use. For instance, using 4 segments as below gets a near-perfect approximation of inferno. You can adjust more/less segments as needed for balance between performance/perfection.

Code: Select all

'''
This script will take any matplotlib colormap and output the xml
for a CloudCompare 256 color scale. Here's a list of Matplotlib maps:

https://matplotlib.org/examples/color/colormaps_reference.html
'''

from matplotlib import cm
from math import trunc
import uuid

# Change the name in quotes to your desired colormap:
colormap = 'inferno'
# Change the value below to set how many segments to use. This should be a value from 2 to 256:
segments = 4

cmap = cm.get_cmap(colormap)

segment = 1 / (segments - 1)

print('<?xml version="1.0" encoding="UTF-8"?>')
print('<CloudCompare>')
print('    <ColorScale version="1">')
print('        <Properties>')
print('            <name>' + colormap + '</name>')
print('            <uuid>{' + str(uuid.uuid4()) + '}</uuid>')
print('            <absolute>0</absolute>')
print('        </Properties>')
print('        <Data>')

for x in range(0, segments):
    rgba = cmap(x * segment)
    r = str(trunc(rgba[0] * 255))
    g = str(trunc(rgba[1] * 255))
    b = str(trunc(rgba[2] * 255))
    print('            <step r="' + r + '" g="' + g + '" b="' + b + '" pos="' + str(x * segment) + '"/>')

print('        </Data>')
print('    </ColorScale>')
print('</CloudCompare>')
This results in:

Code: Select all

<?xml version="1.0" encoding="UTF-8"?>
<CloudCompare>
    <ColorScale version="1">
        <Properties>
            <name>inferno</name>
            <uuid>{3d3ffad0-0ef3-4c06-b57b-0bff7d3177bd}</uuid>
            <absolute>0</absolute>
        </Properties>
        <Data>
            <step r="0" g="0" b="3" pos="0.0"/>
            <step r="120" g="28" b="109" pos="0.3333333333333333"/>
            <step r="237" g="104" b="37" pos="0.6666666666666666"/>
            <step r="252" g="254" b="164" pos="1.0"/>
        </Data>
    </ColorScale>
</CloudCompare>
You can see the resulting color scale in the attached image:
inferno.png
inferno.png (11.46 KiB) Viewed 21168 times
And a comparison with the color scale on top and the original below. You can see it's close, but not perfect. Again, a few more segments would drastically improve the appearance:
inferno_compare.png
inferno_compare.png (25.46 KiB) Viewed 21168 times
daniel
Site Admin
Posts: 7713
Joined: Wed Oct 13, 2010 7:34 am
Location: Grenoble, France
Contact:

Re: Color : better default color scale

Post by daniel »

Nice!
Daniel, CloudCompare admin
coldmast
Posts: 2
Joined: Mon Mar 02, 2020 5:15 pm

Re: Color : better default color scale

Post by coldmast »

Thanks for the code, it works great.

Inferno

Code: Select all

<?xml version="1.0" encoding="UTF-8"?>
<CloudCompare>
    <ColorScale version="1">
        <Properties>
            <name>inferno</name>
            <uuid>{440b54e9-84cd-48e5-a676-becec9b6428c}</uuid>
            <absolute>0</absolute>
        </Properties>
        <Data>
            <step r="0" g="0" b="3" pos="0.0"/>
            <step r="0" g="0" b="4" pos="0.00392156862745098"/>
            <step r="0" g="0" b="6" pos="0.00784313725490196"/>
            <step r="1" g="0" b="7" pos="0.011764705882352941"/>
            <step r="1" g="1" b="9" pos="0.01568627450980392"/>
            <step r="1" g="1" b="11" pos="0.0196078431372549"/>
            <step r="2" g="1" b="14" pos="0.023529411764705882"/>
            <step r="2" g="2" b="16" pos="0.027450980392156862"/>
            <step r="3" g="2" b="18" pos="0.03137254901960784"/>
            <step r="4" g="3" b="20" pos="0.03529411764705882"/>
            <step r="4" g="3" b="22" pos="0.0392156862745098"/>
            <step r="5" g="4" b="24" pos="0.043137254901960784"/>
            <step r="6" g="4" b="27" pos="0.047058823529411764"/>
            <step r="7" g="5" b="29" pos="0.050980392156862744"/>
            <step r="8" g="6" b="31" pos="0.054901960784313725"/>
            <step r="9" g="6" b="33" pos="0.058823529411764705"/>
            <step r="10" g="7" b="35" pos="0.06274509803921569"/>
            <step r="11" g="7" b="38" pos="0.06666666666666667"/>
            <step r="13" g="8" b="40" pos="0.07058823529411765"/>
            <step r="14" g="8" b="42" pos="0.07450980392156863"/>
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            <step r="22" g="11" b="57" pos="0.09803921568627451"/>
            <step r="23" g="11" b="59" pos="0.10196078431372549"/>
            <step r="25" g="11" b="62" pos="0.10588235294117647"/>
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    </ColorScale>
</CloudCompare>

Magma

Code: Select all

<?xml version="1.0" encoding="UTF-8"?>
<CloudCompare>
    <ColorScale version="1">
        <Properties>
            <name>magma</name>
            <uuid>{834bb39c-09c7-4a0e-9de3-12dd6abdfc69}</uuid>
            <absolute>0</absolute>
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</CloudCompare>
coldmast
Posts: 2
Joined: Mon Mar 02, 2020 5:15 pm

Re: Color : better default color scale

Post by coldmast »

Plasma

Code: Select all

<?xml version="1.0" encoding="UTF-8"?>
<CloudCompare>
    <ColorScale version="1">
        <Properties>
            <name>plasma</name>
            <uuid>{05af89de-7121-41c0-83c4-deaa7275072f}</uuid>
            <absolute>0</absolute>
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</CloudCompare>
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